CLC Main Workbench Alternatives

CLC Main Workbench is described as 'QIAGEN CLC Main Workbench is ideal for DNA, RNA, & protein sequence data analysis with a wide variety of features, no advanced computer skills required! The workbench is available for Windows, Mac OS X, and Linux platforms' and is an app in the education & reference category. There are more than 25 alternatives to CLC Main Workbench for a variety of platforms, including Windows, Mac, Linux, Web-based and SaaS apps. The best CLC Main Workbench alternative is VectorBee, which is free. Other great apps like CLC Main Workbench are Platforma, Chromas, BioEdit and Genophore.

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Alternatives
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Alternatives list

  1. Geneious icon
     1 like

    Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!

    32 Geneious alternatives

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    Good alternative?
     
  2. Serial Cloner icon
     2 likes

    Serial Cloner is a Molecular Biology software.

    It provides tools with an intuitive interface that assists you in DNA cloning, sequence analysis and visualization.

    28 Serial Cloner alternatives

    Cost / License

    • Free
    • Proprietary

    Application type

    Alerts

    • Discontinued

    Platforms

    • Mac
    • Windows
    • Linux
    Good alternative?
     
  3. DNADynamo icon
     3 likes

    DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.

    Cost / License

    • Paid
    • Proprietary

    Application type

    Platforms

    • Mac
    • Windows
    • Linux
    Good alternative?
     
  4. PDRAW32 icon
     1 like

    Scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates annealing temperatures for PCR.

    Cost / License

    • Freemium
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    Good alternative?
     
  5. Software for viewing, editing and analyzing plasmid sequences.

    Cost / License

    • Free
    • Proprietary

    Application type

    Platforms

    • Mac
    • Windows
    Good alternative?
     
  6. Complete bioinformatics toolkit for a wide range of genomics analysis needs, including transcriptomics, variant calling, epigenomics, metagenomics, comparative genomics and many more.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    Good alternative?
     
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  7. Scifeon icon
     Like

    A modern digital platform combining LIMS and ELN in a modular, compliant system for biotech and pharma labs. It supports fast deployment, audit trails, automated workflows, and real-time dashboards.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Online
    • Software as a Service (SaaS)
    Good alternative?
     
  8. GenePad icon
     1 like

    A cross-platform gene map editor for everyday molecular cloning: browse and edit plasmid maps, manage sequence annotations, analyze restriction sites, and align Sanger traces.

    Cost / License

    • Free Personal
    • Proprietary

    Application type

    Platforms

    • Mac
    • Windows
    • Linux
    • Android Tablet
    • Android
    Good alternative?
     
  9. PlasmaDNA icon
     Like

    PlasmaDNA is a free DNA analysis and manipulation software. It is simple to learn and to use, and contains multiple features designed to help with:

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Mac
    • Windows
    Good alternative?
     
  10. CLC bio icon
     Like

    DNA analysis for the workbench.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Windows
    Good alternative?
     
  11.  Like

    Consed is a program for viewing, editing, and finishing DNA sequence assemblies. Originally developed for sequence assemblies created with phrap, recent versions also support other sequence assembly programs like Newbler.

    Cost / License

    • Paid
    • Proprietary

    Application type

    Platforms

    • Linux
    Good alternative?
     
  12. Mendelgen icon
     3 likes

    Mendelgen is an online DNA vector editing and manipulation tool. It offers features like MSA alignment, codon optimization, feature detection, and more. It's wrapped in a beautiful and intuitive design to make your experience easy and enjoyable.

    Cost / License

    • Free
    • Proprietary

    Application type

    Platforms

    • Online
    Good alternative?
     
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